BGPT: Visualize Data: Create tables BindingGYM-Single metrics PPAC baselines RMSE PCC Hits@k

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Visualize Data Request: BindingGYM-Single metrics vs PPAC baselines

I can generate the requested tables and BindingGYM-Single visual summaries (RMSE, PCC, Hits@k) against PPAC baselines—but you did not provide the underlying raw numbers (or the dataset/file containing them).

What I need from you (choose one):

Upload the result file(s) containing BindingGYM-Single metrics and PPAC baseline metrics (recommended).
Paste a table of raw values (one row per model/method; columns for RMSE, PCC, Hits@k with the exact k values).
Provide the per-target/per-sample predictions (so Hits@k can be computed) plus ground truth.

1) Required metrics schema (table structure)

Since you asked for BindingGYM-Single metrics and PPAC baselines with RMSE, PCC, and Hits@k, the following columns must be populated from your raw results.

BindingGYM-Single vs PPAC (metrics table)

Method	RMSE	PCC	Hits@k (k values)	Hits@k values	Split / Dataset / Protocol

2) Visualization placeholders (only after you provide raw values)

Once you provide the numeric results, I will produce:

RMSE bar chart (BindingGYM-Single vs PPAC baselines)
PCC bar chart (BindingGYM-Single vs PPAC baselines)
Hits@k curve/cluster plot (for each k requested)
Scatter plot of RMSE vs PCC with marker color by family (BindingGYM-Single vs PPAC)

Copy/paste format (paste your raw numbers)

Paste something like this (no examples are generated here):

Method,RMSE,PCC,HitsK_kvalues,HitsK_values,Split
...

I will then render the complete tables and plots.

Quick BGPT actions

This will iteratively generate the requested BindingGYM-Single metrics tables and PPAC baseline comparisons once the raw metrics/predictions are available (from your upload or pasted input).

Feedback:

Updated: April 05, 2026

Keep Exploring

What exact k values are used for Hits@k, and are they computed per-target or globally across the dataset?

Do BindingGYM-Single and PPAC baselines use the same evaluation split/protocol, and are RMSE/PCC computed on the same target set?

Analysis Wizard

It will ingest your uploaded metrics/predictions, compute RMSE, PCC, and Hits@k for specified k, then output a consolidated comparison table for BindingGYM-Single and PPAC baselines.

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